API for tinglab/redPATH
Reconstructing the pseudo development time of cell lineages in single cell RNA-Seq data and applications in cancer.
| Global functions | |
|---|---|
| bubblesort_index | Man page |
| calc_all_hmm_diff_parallel | Man page |
| calc_correlation | Man page |
| change_index | Man page |
| distribution_plot | Man page |
| ensembl_to_mgi | Man page |
| entrez_to_mgi | Man page |
| filter_exp | Man page |
| gene_selection | Man page |
| gene_selection_intersection | Man page |
| get_GO_exp | Man page |
| get_gene_cluster | Man page |
| get_specific_gene_exprs | Man page |
| hamiltonian_path_as | Man page |
| hamiltonian_path_force | Man page |
| infer_GO_summaries | Man page |
| kendall_correlation | Man page |
| kl_cpp | Man page |
| kmeans_clustering | Man page |
| llorens_exprs | Man page |
| llorens_labels | Man page |
| mean_score_plot | Man page |
| mgh107_portal_exprs | Man page |
| mgh107_portal_labels | Man page |
| mgi_to_entrez | Man page |
| plot_cycle_diff_3d | Man page |
| plot_diff_3d | Man page |
| plot_gene_exprs | Man page |
| plot_heatmap_analysis | Man page |
| plot_hmm_full | Man page |
| plot_specific_gene_exprs | Man page |
| redpath | Man page |
| statistical_test | Man page |
