distribution_plot: Visualization of G0-like distribution in mean scores

Description Usage Arguments Examples

Description

Provides boxplot for visualizing the cell cluster distribution across different cell cycle stages mean scores

Usage

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distribution_plot(mean_scores, kmean_result)

Arguments

mean_scores

The mean score results returned from the reCAT software, "get_score"

kmean_result

The classification of kmeans clustering result.

Examples

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cycle_mean_scores <- get_score(t(test_exp))$mean_score
kmean_classification <- kmeans_clustering(cycle_mean_scores)
require(scater)
distribution_plot(cycle_mean_scores, kmean_classification)

tinglab/redPATH documentation built on May 31, 2019, 10:37 a.m.