Description Usage Arguments Examples
Provides boxplot for visualizing the cell cluster distribution across different cell cycle stages mean scores
1 | distribution_plot(mean_scores, kmean_result)
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mean_scores |
The mean score results returned from the reCAT software, "get_score" |
kmean_result |
The classification of kmeans clustering result. |
1 2 3 4 | cycle_mean_scores <- get_score(t(test_exp))$mean_score
kmean_classification <- kmeans_clustering(cycle_mean_scores)
require(scater)
distribution_plot(cycle_mean_scores, kmean_classification)
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