ideas_predict: ideas_predict
In tobyjohnson/gtx: Genetics ToolboX

Description Usage Arguments Author(s) See Also

Predict IDEAS states from input GWAS data supplied by ideas_make

1
2
3

ideas_predict(.data, states_data = NULL, states = NULL,
  permute = FALSE, inter = 5, binsz = 200, pcut = 6, CI = 0.95,
  seed = NULL, db = config_db())

`.data`	`ideas_make` input data
`states`	[NULL] TODO
`permute`	[FALSE] TODO
`inter`	[5] TODO
`binsz`	[200] Padding around each cred set SNP.
`pcut`	[6] TODO
`CI`	[0.95] Cred set confidence interval.
`seed`	[NULL] Set seed for RNG number generator.
`db`	= ['gtx::config_db()'] Database contained IDEAS states data.
`alpha`	[0.99] TODO
`layer`	[10] TODO
`permute`	[FALSE] TODO
`states`	Select subset of states. Not currently used as of 2019-01-11.