ideas_wrapper: ideas_preload_states
In tobyjohnson/gtx: Genetics ToolboX

Description Usage Arguments Author(s) See Also

Preload all IDEA states across "all" chrom. This is ideal for when running ideas_predict across multiple GWAS; however, it would be slower for single GWAS.

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ideas_wrapper(analysis, ht_load = FALSE, states_data, relaxed = 3,
  group = FALSE, impala = getOption("gtx.impala", NULL),
  dbc = getOption("gtx.dbConnection", NULL), db = config_db())

`analysis`	A string or vector of analysis ids.
`ht_load`	[FALSE] TRUE = Load the IDEAS states for high throughput.
`states_data`	Pass `ideas_preload_states` data instead of loading it.
`relaxed`	[3] Cell types count toward total if they are in the top # of 'relaxed' cell types. e.g., 3 = The top 3 cell types count.
`group`	[FALSE] TRUE = group cell types together.
`impala`	[getOption("gtx.impala", NULL)]
`dbc`	[getOption("gtx.dbConnection", NULL)]
`db`	['gtx::config_db()']