ideas_preload_states: ideas_preload_states
In tobyjohnson/gtx: Genetics ToolboX
Description
Usage
Arguments
Value
Author(s)
See Also
View source: R/ideas_predict.R
Description
Preload all IDEA states across "all" chrom. This is ideal for when running ideas_predict across multiple GWAS;
however, it would be slower for single GWAS.
Usage
1
2
ideas_preload_states(impala = getOption("gtx.impala", NULL),
db = config_db(), chrom = c(1:22, "X", "Y"))
Arguments
impala
[getOption("gtx.impala", NULL)] Implyr impala connection
db
[config_db()] Database to use for queries.
chrom
[c(1:22, "X", "Y")] Specify which chromosomes to load.
Value
states_data to be used with ideas_predict
Author(s)
Karsten Sieber karsten.b.sieber@gsk.com
See Also
Other ideas_predict: ideas_gwas_plot,
ideas_gwas_summarize,
ideas_loci_summarize,
ideas_make, ideas_predict,
ideas_wrapper
tobyjohnson/gtx documentation built on Aug. 30, 2019, 8:07 p.m.
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Description Usage Arguments Value Author(s) See Also
View source: R/ideas_predict.R
Description
Preload all IDEA states across "all" chrom. This is ideal for when running ideas_predict across multiple GWAS; however, it would be slower for single GWAS.
Usage
1 2 | ideas_preload_states(impala = getOption("gtx.impala", NULL),
db = config_db(), chrom = c(1:22, "X", "Y"))
|
Arguments
impala |
[getOption("gtx.impala", NULL)] Implyr impala connection |
db |
[config_db()] Database to use for queries. |
chrom |
[c(1:22, "X", "Y")] Specify which chromosomes to load. |
Value
states_data to be used with ideas_predict
Author(s)
Karsten Sieber karsten.b.sieber@gsk.com
See Also
Other ideas_predict: ideas_gwas_plot,
ideas_gwas_summarize,
ideas_loci_summarize,
ideas_make, ideas_predict,
ideas_wrapper
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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