API for uc-bd2k/CLEAN
Clustering Enrichment Analysis
| Global functions | |
|---|---|
| CLEAN | Man page |
| CLEAN-package | Man page |
| GRS | Man page Source code |
| LRpath | Man page |
| RS | Man page |
| RandomSet | Man page |
| `.onLoad` | Source code |
| `CLEAN` | Source code |
| `LRpath` | Source code |
| `RS` | Source code |
| `RandomSet` | Source code |
| `annotateChipSeqPeaks` | Source code |
| `atr2r` | Source code |
| `call.treeview` | Source code |
| `cdt2r` | Source code |
| `chipSeqWeightedSum` | Source code |
| `createRefGenome` | Source code |
| `funcClustAnnot` | Source code |
| `geneListEnrichment` | Source code |
| `geneSigInClustering_nullDistr` | Source code |
| `geneSigInClustering` | Source code |
| `geneSigInList` | Source code |
| `generateTreeViewFiles` | Source code |
| `genesInEnrichedCategories` | Source code |
| `getAllClusters` | Source code |
| `getBinarySubTree` | Source code |
| `getFunctionalCategories` | Source code |
| `gtr2r` | Source code |
| `initializeCategories` | Source code |
| `initializeChipSeq` | Source code |
| `insertCdt` | Source code |
| `nonHierarchicalClustering` | Source code |
| `plotCLEANscore` | Source code |
| `primSetSigInClustering_nullDistr` | Source code |
| `primSetSigInClustering` | Source code |
| `pruneMinFDR` | Source code |
| `r2fni` | Source code |
| `runCLEAN` | Source code |
| `significantCategories` | Source code |
| annotateChipSeqPeaks | Man page |
| atr2r | Man page |
| bCa | Man page |
| cMap | Man page |
| call.treeview | Man page |
| cdt2r | Man page |
| chipSeqWeightedSum | Man page |
| convertFunctionalCategories | Man page |
| convertGeneTable | Man page |
| createRefGenome | Man page |
| funcClustAnnot | Man page |
| geneListEnrichment | Man page |
| geneSigInClustering | Man page |
| geneSigInClustering_nullDistr | Man page |
| geneSigInList | Man page |
| generateTreeViewFiles | Man page |
| genesInEnrichedCategories | Man page |
| getAllClusters | Man page |
| getBinarySubTree | Man page |
| getFunctionalCategories | Man page |
| gimmOut | Man page |
| gtr2r | Man page |
| initializeCategories | Man page |
| insertCdt | Man page |
| nonHierarchicalClustering | Man page |
| plotCLEANscore | Man page |
| primSetSigInClustering | Man page |
| pruneMinFDR | Man page |
| qvalue | Man page |
| r2atr | Man page |
| r2cdt | Man page |
| r2fni | Man page |
| r2gtr | Man page |
| runCLEAN | Man page |
| significantCategories | Man page |
