order_metacoder_data: Order Metacoder Observation Data
In vallenderlab/MicrobiomeR: Analyze Microbiome Data
Description
Usage
Arguments
Details
Value
See Also
View source: R/metacoder-formatting.R
Description
A function for changing the order of the observation data in a Taxmap object
Usage
1
order_metacoder_data(obj)
Arguments
obj
An object to be converted to a Taxmap object with create_taxmap.
Details
Changes the order of the observation tables in metacoder_object$data to
otu_abundance, otu_annotations, otu_proportions, sample_data, phy_tree, taxa_abundance,
taxa_proportions, statistical_data, and stats_tax_data respectively.
Value
A taxmap object with observation data in the proper order for downstream analysis.
See Also
Other Validation: is_analyzed_format,
is_basic_format,
is_phyloseq_format,
is_raw_format,
validate_MicrobiomeR_format,
which_format
vallenderlab/MicrobiomeR documentation built on Aug. 30, 2019, 11:24 p.m.
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Description Usage Arguments Details Value See Also
View source: R/metacoder-formatting.R
Description
A function for changing the order of the observation data in a Taxmap object
Usage
1 | order_metacoder_data(obj)
|
Arguments
obj |
An object to be converted to a Taxmap object with |
Details
Changes the order of the observation tables in metacoder_object$data to otu_abundance, otu_annotations, otu_proportions, sample_data, phy_tree, taxa_abundance, taxa_proportions, statistical_data, and stats_tax_data respectively.
Value
A taxmap object with observation data in the proper order for downstream analysis.
See Also
Other Validation: is_analyzed_format,
is_basic_format,
is_phyloseq_format,
is_raw_format,
validate_MicrobiomeR_format,
which_format
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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