which_format: Which MicrobiomeR Format

In vallenderlab/MicrobiomeR: Analyze Microbiome Data

Description

A function for looking at a Taxmap object and returning the identified MicrobiomeR format.

Usage

which_format(obj)

Arguments

obj	A Taxmap object.

Details

This function is used to get basic information about the format of the taxmap object that is supplied by the user.

Value

If the format is verified it returns a character string denoting the identified format.

See Also

Other Validation: is_analyzed_format, is_basic_format, is_phyloseq_format, is_raw_format, order_metacoder_data, validate_MicrobiomeR_format

Examples

## Not run: 
if(interactive()){
library(MicrobiomeR)
fmt <- which fmt(MicrobiomeR::raw_silva_2)
print(fmt)
 }

## End(Not run)

vallenderlab/MicrobiomeR documentation built on Aug. 30, 2019, 11:24 p.m.