Package contains high-level functions for retrieving molecular interaction data from IntAct database, using PSICQUIC web service and manipulating that data. Useful options include: retrieve full interactome of a given species, query molecular interaction databases using MIQL, retrieve PPI for a random set of proteins, download protein sequences (FASTA) for canonical, isoform, post-processed chain id. This package also includes functions specific to my research project at Petsalaki group at EMBL-EBI. Builds upon Bioconductor PSICQUIC package and uses data.table.
|Maintainer||Vitalii Kleshchevnikov <[email protected]>|
|Package repository||View on GitHub|
Install the latest version of this package by entering the following in R:
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.