loadTaxIDAllLower: load all lower taxonomy ID (all descendants)
In vitkl/MItools: Protein interaction data tools: retrieving data from IntAct and most other databases using PSICQUIC service
Description
Usage
Arguments
Value
Author(s)
Examples
Description
loadTaxIDAllLower loads all load all lower taxonomy ID for a given taxonomy ID
Usage
1
loadTaxIDAllLower(taxid, dir, with_description = F)
Arguments
file
directory where to save/look for the local copy
Value
loadTaxIDAllLower returns list containing the character vector of all lower taxonomy ID for a given taxonomy ID (saves it to a file) and the input taxonomy ID (taxid) and optionally, a data.table containing the description of all lower
Author(s)
Vitalii Kleshchevnikov
Vitalii Kleshchevnikov
Examples
1
2
3
# Find all human sub-species
loadTaxIDAllLower(taxid = 9606, dir = "./")
loadTaxIDAllLower(taxid = 9606, dir = "./", with_description = T)
vitkl/MItools documentation built on May 29, 2019, 2:55 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
loadTaxIDAllLower loads all load all lower taxonomy ID for a given taxonomy ID
Usage
1 | loadTaxIDAllLower(taxid, dir, with_description = F)
|
Arguments
file |
directory where to save/look for the local copy |
Value
loadTaxIDAllLower returns list containing the character vector of all lower taxonomy ID for a given taxonomy ID (saves it to a file) and the input taxonomy ID (taxid) and optionally, a data.table containing the description of all lower
Author(s)
Vitalii Kleshchevnikov
Vitalii Kleshchevnikov
Examples
1 2 3 | # Find all human sub-species
loadTaxIDAllLower(taxid = 9606, dir = "./")
loadTaxIDAllLower(taxid = 9606, dir = "./", with_description = T)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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