removeInteractionNoFASTA: Remove interactions if one participant doesn't have FASTA...
In vitkl/MItools: Protein interaction data tools: retrieving data from IntAct and most other databases using PSICQUIC service
Description
Usage
Arguments
Author(s)
Description
filter molecular interaction data by the list of FASTA sequences in AAStringSet
Usage
1
removeInteractionNoFASTA(MITABdata, fasta)
Arguments
MITABdata
object of any clean_MItab class (the class that contains "clean_MItab" in it's name and is initially produced by cleanMITAB)
fasta
AAStringSet, names are UniProtKB accessions
Author(s)
Vitalii Kleshchevnikov
vitkl/MItools documentation built on May 29, 2019, 2:55 p.m.
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Description Usage Arguments Author(s)
Description
filter molecular interaction data by the list of FASTA sequences in AAStringSet
Usage
1 | removeInteractionNoFASTA(MITABdata, fasta)
|
Arguments
MITABdata |
object of any clean_MItab class (the class that contains "clean_MItab" in it's name and is initially produced by |
fasta |
AAStringSet, names are UniProtKB accessions |
Author(s)
Vitalii Kleshchevnikov
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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