getMDFR.AllScores.Abundance: Get all scores related to model fits to abundance time series...

In wStockhausen/rTCSAM02: A set of tools to set up input for, and interact with output from, TCSAM02 model runs

Get all scores related to model fits to abundance time series for fleet data components

Description

Function to get model fits to abundance time series as z-scores for fleet data components.

Usage

getMDFR.AllScores.Abundance(
  objs,
  fleet.type = c("survey", "fishery"),
  catch.type = c("index", "retained", "discarded", "total"),
  verbose = FALSE
)

Arguments

objs	single model report list object, or named list of them
fleet.type	fleet type ('fishery' or 'survey')
catch.type	catch type ('index','retained','discarded',or 'total')
verbose	flag (T/F) to print diagnostic info

Details

Uses getMDFR.AllScores.Abundance1() to get scores via getMDFR.AllScoresForABData(). Returned dataframe is in canonical format.

Column type indicates the type of value, which is one of "z-score","observed","predicted","sdobs","xcv","stdv", and "useFlg".

Value

dataframe

wStockhausen/rTCSAM02 documentation built on April 16, 2024, 6:25 a.m.