getMDFR.OFCs.FleetData: Get objective function components for growth data from a...

View source: R/getMDFR.OFCs.FleetData.R

getMDFR.OFCs.FleetDataR Documentation

Get objective function components for growth data from a tcsam02.resLst or tcsam02.rep object

Description

Function to get objective function components for growth data from a tcsam02.resLst or tcsam02.rep object.

Usage

getMDFR.OFCs.FleetData(
  obj,
  category = c("surveys", "fisheries"),
  verbose = FALSE
)

Arguments

obj
  • a tcsam02.resLst or tcsam02.rep object

category
  • fleet category ("surveys" or "fisheries")

verbose
  • flag (T/F) to print diagnostic info

Details

Returned dataframe has columns:

  • case - model case (blank, to be filled in by caller)

  • category - fleet category

  • fleet - fleet name

  • catch.type - catch type

  • data.type - data type

  • fit.type - fit type

  • nll.type - likelihood type

  • y - year

  • x - sex

  • m - maturity state

  • s - shell condition

  • rmse - root mean squared error

  • wgt - likelihood weight

  • nll - (unweighted) negative log-likelihood

  • objfun - objective function value

Value

a dataframe


wStockhausen/rTCSAM02 documentation built on Aug. 27, 2024, 7:18 p.m.