getMDFR.Fits.FleetData: Get model fits to biomass for fleet data components

In wStockhausen/rTCSAM02: A set of tools to set up input for, and interact with output from, TCSAM02 model runs

Get model fits to biomass for fleet data components

Description

Function to get model fits to biomass data for fleet data components.

Usage

getMDFR.Fits.FleetData(
  objs,
  fleet.type = c("survey", "fishery"),
  data.type = c("abundance", "biomass", "n.at.z"),
  catch.type = c("index", "total", "discard", "retained"),
  ci = 0.8,
  verbose = FALSE
)

Arguments

objs	single model report list object, or named list of them
fleet.type	fleet type ('fishery' or 'survey')
data.type	data type ('abundance', 'biomass', or 'n.at.z')
catch.type	catch type ('index','total','discard', or 'retained')
ci	confidence intervals for observations
verbose	flag (T/F) to print diagnostic info

Details

Uses getMDFR.FitsForABData() and getMDFR.FitsForSizeComps(). Returned dataframe is in canonical format

Value

dataframe

wStockhausen/rTCSAM02 documentation built on April 16, 2024, 6:25 a.m.