plotExprProgram: plotExprProgram

In wguo-research/scCancer: A package for automated processing of single cell RNA-seq data in cancer

plotExprProgram

Description

plotExprProgram

Usage

plotExprProgram(
  H,
  cell.annotation,
  bool.limit = T,
  sel.clusters = NULL,
  savePath = NULL
)

Arguments

H	The decomposed right matrix H.
cell.annotation	A data.frame of cells' annotation containing cluster information.
bool.limit	A logical value indicating whether to set upper and lower limit when plot heatmap.
sel.clusters	A vector of selected clusters to analyze. The default is NULL and all clusters will be used.
savePath	A path to save the results files. If NULL, the 'statPath' will be used instead.

Value

A heatmap for cells' expression programs.

wguo-research/scCancer documentation built on May 26, 2024, 9:12 p.m.