predCellType: predCellType
In wguo-research/scCancer: A package for automated processing of single cell RNA-seq data in cancer
predCellType R Documentation
predCellType
Description
predCellType
Usage
predCellType(X.test, ct.templates = NULL, species = "human")
Arguments
X.test
A cells expression matrix (row for genes, column for cells).
ct.templates
A list of gene weight vectors for each cell type.
species
A character string indicating what species the sample belong to.
Only "human"(default) or "mouse" are allowed.
Value
A list of predicted cell types and the relative correlations.
wguo-research/scCancer documentation built on May 26, 2024, 9:12 p.m.
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| predCellType | R Documentation |
predCellType
Description
predCellType
Usage
predCellType(X.test, ct.templates = NULL, species = "human")
Arguments
X.test |
A cells expression matrix (row for genes, column for cells). |
ct.templates |
A list of gene weight vectors for each cell type. |
species |
A character string indicating what species the sample belong to. Only "human"(default) or "mouse" are allowed. |
Value
A list of predicted cell types and the relative correlations.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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