plotGeneSet: plotGeneSet
In wguo-research/scCancer: A package for automated processing of single cell RNA-seq data in cancer
plotGeneSet R Documentation
plotGeneSet
Description
plotGeneSet
Usage
plotGeneSet(cell.annotation, prefix = "GS__", bool.limit = T, savePath = NULL)
Arguments
cell.annotation
A data.frame of cells' annotation containing gene set signature scores.
prefix
A prefix string of column names for gene sets.
bool.limit
A logical value indicating whether to set upper and lower limit when plot heatmap.
savePath
A path to save the results files. If NULL, the 'statPath' will be used instead.
Value
A heatmap for gene set signature scores.
wguo-research/scCancer documentation built on May 26, 2024, 9:12 p.m.
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| plotGeneSet | R Documentation |
plotGeneSet
Description
plotGeneSet
Usage
plotGeneSet(cell.annotation, prefix = "GS__", bool.limit = T, savePath = NULL)
Arguments
cell.annotation |
A data.frame of cells' annotation containing gene set signature scores. |
prefix |
A prefix string of column names for gene sets. |
bool.limit |
A logical value indicating whether to set upper and lower limit when plot heatmap. |
savePath |
A path to save the results files. If NULL, the 'statPath' will be used instead. |
Value
A heatmap for gene set signature scores.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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