computeMatTDist: Build a matrix indicating for each pairs of individuals how...
In xavierdidelot/EpiPhylo: Inference of Transmission Tree from a Dated Phylogeny
computeMatTDist R Documentation
Build a matrix indicating for each pairs of individuals how many intermediates there are in the transmission chain
Description
Build a matrix indicating for each pairs of individuals how many intermediates there are in the transmission chain
Usage
computeMatTDist(record, burnin = 0.5)
Arguments
record
Output from inferTTree function
burnin
Proportion of the MCMC output to be discarded as burnin
Value
Matrix of intermediates in transmission chains between pairs of hosts
xavierdidelot/EpiPhylo documentation built on Sept. 28, 2023, 6:39 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| computeMatTDist | R Documentation |
Build a matrix indicating for each pairs of individuals how many intermediates there are in the transmission chain
Description
Build a matrix indicating for each pairs of individuals how many intermediates there are in the transmission chain
Usage
computeMatTDist(record, burnin = 0.5)
Arguments
record |
Output from inferTTree function |
burnin |
Proportion of the MCMC output to be discarded as burnin |
Value
Matrix of intermediates in transmission chains between pairs of hosts
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.