plotTTree2: Plot a transmission tree in an economic format
In xavierdidelot/EpiPhylo: Inference of Transmission Tree from a Dated Phylogeny
plotTTree2 R Documentation
Plot a transmission tree in an economic format
Description
Plot a transmission tree in an economic format
Usage
plotTTree2(
ttree,
showLabels = TRUE,
showMissingLinks = 0,
maxTime = NA,
cex = 1
)
Arguments
ttree
Transmission tree
showLabels
Boolean for whether or not to show the labels
showMissingLinks
Option for how to show missing links: (0) as dots, (1) as several gray levels, (2) as a single gray level
maxTime
Maximum value of time to show on x axis
cex
Expansion factor
Value
Returns invisibly the first parameter
Examples
plotTTree2(extractTTree(simulateOutbreak()))
xavierdidelot/EpiPhylo documentation built on Sept. 28, 2023, 6:39 p.m.
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| plotTTree2 | R Documentation |
Plot a transmission tree in an economic format
Description
Plot a transmission tree in an economic format
Usage
plotTTree2(
ttree,
showLabels = TRUE,
showMissingLinks = 0,
maxTime = NA,
cex = 1
)
Arguments
ttree |
Transmission tree |
showLabels |
Boolean for whether or not to show the labels |
showMissingLinks |
Option for how to show missing links: (0) as dots, (1) as several gray levels, (2) as a single gray level |
maxTime |
Maximum value of time to show on x axis |
cex |
Expansion factor |
Value
Returns invisibly the first parameter
Examples
plotTTree2(extractTTree(simulateOutbreak()))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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