LogTFIDF: Compute the log TF-IDF transform for accessibility matrices...
In yanwu2014/chromfunks: Functions for Analyzing Chromatin Accessibility Data
LogTFIDF R Documentation
Compute the log TF-IDF transform for accessibility matrices
Adapted from Signac
Description
Compute the log TF-IDF transform for accessibility matrices
Adapted from Signac
Usage
LogTFIDF(counts, scale.factor = 10000, verbose = T)
Arguments
counts
Accessibility counts matrix
scale.factor
Factor to scale normalized counts with. Default is 10000.
verbose
Print progress
Value
Counts matrix normalized with the log(TF-IDF + 1) transform
yanwu2014/chromfunks documentation built on Aug. 20, 2023, 9:17 a.m.
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| LogTFIDF | R Documentation |
Compute the log TF-IDF transform for accessibility matrices Adapted from Signac
Description
Compute the log TF-IDF transform for accessibility matrices Adapted from Signac
Usage
LogTFIDF(counts, scale.factor = 10000, verbose = T)
Arguments
counts |
Accessibility counts matrix |
scale.factor |
Factor to scale normalized counts with. Default is 10000. |
verbose |
Print progress |
Value
Counts matrix normalized with the log(TF-IDF + 1) transform
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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