plotReaction: show reaction diagram

In zgzhao/gmetab: syzMetab: R package for metabolic network analysis

Description

This function is not relevant to KEGG pathway. It is designed for illustration only.

Usage

plotReaction(
  substrates,
  products,
  r.name,
  shape.chem = "ellipse",
  shape.react = "rect",
  lcol = "gray",
  arr.pos = 0.7,
  arr.col = "gray",
  arr.tcol = "transparent",
  box.prop = 0.5,
  shadow.size = 0,
  relsize = 0.85,
  ...
)

Arguments

r.name	reaction name
...	pars passed to diagram::plotmat
substrate	substrate names
product	product names

Details

Install "diagram" package manually before using this function.

Author(s)

zhao

zgzhao/gmetab documentation built on Dec. 23, 2021, 9:17 p.m.