pp_findVariableFeatures: Find variable features across batches

In zzwch/convgene: This package is designed to conveniently convert gene between human and mouse.

Description

Identifies Highly variable features (HVFs) for each batch, then combine them into a single vector of HVFs by count.

Usage

pp_findVariableFeatures(
  object,
  split_by = "ident",
  groups = NULL,
  nfeatures = 2000,
  assay = "RNA",
  log_var = F,
  ...
)

Arguments

object	Seurat object
split_by	a colname of meta.data
groups	only some groups of split_by are considered.
nfeatures	Number of features to select as top variable features; only used when selection.method is set to 'dispersion' or 'vst'
...	Arguments passed to Seurat::FindVariableFeatures

Value

A vector of variable features

zzwch/convgene documentation built on July 11, 2021, 9:41 a.m.