pp_runHarmony: A Wrapper of harmony::RunHarmony

In zzwch/convgene: This package is designed to conveniently convert gene between human and mouse.

Description

RunHarmony did not support dims.use actually, so I wrote this wrapper function to support that.

Usage

pp_runHarmony(object, dims.use, group.by.vars, ...)

Arguments

object	Seurat object
dims.use	Which PCA dimensions to use for Harmony. By default, use all
group.by.vars	Which variable(s) to remove (character vector).
...	other parameters to be used in harmony::HarmonyMatrix

Value

Seurat (version 3) object.

zzwch/convgene documentation built on July 11, 2021, 9:41 a.m.