pl_splitDimplot: plot multiple DimPlot for each batch

In zzwch/convgene: This package is designed to conveniently convert gene between human and mouse.

Description

This may be useful for displaying multiple datasets

Usage

pl_splitDimplot(
  object,
  reduction = "umap",
  split_by = "Dataset",
  groups_label = c("seurat_clusters"),
  groups = c("Batch", "Phase"),
  coord_fixed_ratio = 1,
  pt.size = 1,
  colors = scanpy_colors$default_64
)

Arguments

object	Seurat object
reduction	umap/tsne/pca
split_by	split dimplot by this metadata
groups_label	plot using DimPlot with label = TRUE
groups	plot using pl_dimplot
coord_fixed_ratio	only valid for groups
pt.size	point size
colors	point color

Value

multiple plots

zzwch/convgene documentation built on July 11, 2021, 9:41 a.m.