tl_GeneSetScore: Gene Set Scores

In zzwch/convgene: This package is designed to conveniently convert gene between human and mouse.

Description

Gene Set Scores

Usage

tl_GeneSetScore(
  object,
  genesets,
  method = c("pca", "moduleScore", "gsva", "ssgsea", "zscore", "plage"),
  ...
)

Arguments

object	Seurat3 object
genesets	a list of one or more sets of features
method	supported methods. It turns the sparse matrix into dense matrix for methods in GSVA.
...	other params passed to corresponding method

Value

a list of vectors of score values

zzwch/convgene documentation built on July 11, 2021, 9:41 a.m.