| addSubNode |
Man page
|
| as |
Man page
|
| as,phylo,phylo4d_ext-method |
Man page
|
| as,phylo4,phylo4d_ext-method |
Man page
|
| as,phylo4d,phylo4d_ext-method |
Man page
|
| as-method |
Man page
|
| coerce,phylo,phylo4d_ext-method |
Man page
|
| coerce,phylo4,phylo4d_ext-method |
Man page
|
| coerce,phylo4d,phylo4d_ext-method |
Man page
|
| coerce-methods |
Man page
|
| collapse.singletons |
Man page
|
| collapse.subnodes |
Man page
|
| collapse.to.singles |
Man page
|
| deep.phy.copy |
Man page
|
| expand.singles |
Man page
|
| get.nexus.comments |
Man page
|
| get.nodenames |
Man page
|
| get.tree.weights |
Man page
|
| getEmptyDataFrame |
Man page
|
| getSubNodeData |
Man page
|
| getSubNodeEdgeInds |
Man page
|
| getSubNodePosish |
Man page
|
| has.block |
Man page
|
| has.characters2 |
Man page
|
| has.weights |
Man page
|
| hasData |
Man page
|
| hasData,list-method |
Man page
|
| hasData,phylo-method |
Man page
|
| hasData,phylo4-method |
Man page
|
| hasData,phylo4d-method |
Man page
|
| hasData-methods |
Man page
|
| hasDataColumn |
Man page
|
| hasDataColumn,phylo,ANY-method |
Man page
|
| hasDataColumn,phylo4,ANY-method |
Man page
|
| hasDataColumn,phylo4d,character-method |
Man page
|
| hasDataColumn,phylo4d,numeric-method |
Man page
|
| hasDataColumn-methods |
Man page
|
| hasSubNodes |
Man page
|
| hasSubNodes,list-method |
Man page
|
| hasSubNodes,phylo-method |
Man page
|
| hasSubNodes,phylo4-method |
Man page
|
| hasSubNodes,phylo4d_ext-method |
Man page
|
| hasSubNodes-methods |
Man page
|
| hasWeight |
Man page
|
| hasWeight,list-method |
Man page
|
| hasWeight,phylo4d_ext-method |
Man page
|
| is.simmap |
Man page
|
| match.order |
Man page
|
| nSubNodes |
Man page
|
| newlabels.v15 |
Man page
|
| newlabels.v1x |
Man page
|
| phyext |
Man page
|
| phyext,character-method |
Man page
|
| phyext,list-method |
Man page
|
| phyext,phylo-method |
Man page
|
| phyext,phylo4-method |
Man page
|
| phyext,phylo4d-method |
Man page
|
| phyext,phylo4d_ext-method |
Man page
|
| phyext-methods |
Man page
|
| phyextPlot |
Man page
|
| phylo4d_ext-class |
Man page
|
| plot,phylo4d_ext,missing-method |
Man page
|
| read.characters2 |
Man page
|
| read.nexus.block |
Man page
|
| read.nexus.simmap |
Man page
|
| read.simmap |
Man page
|
| read.simmap.new |
Man page
|
| rmdata |
Man page
|
| rmdata,brownie,character,missing-method |
Man page
|
| rmdata,brownie,numeric,ANY-method |
Man page
|
| rmdata,brownie,numeric,missing-method |
Man page
|
| rmdata,brownie,numeric,numeric-method |
Man page
|
| rmdata,list,ANY,missing-method |
Man page
|
| rmdata,phylo4d,character,missing-method |
Man page
|
| rmdata,phylo4d,numeric,missing-method |
Man page
|
| rmdata,phylo4d_ext,character,missing-method |
Man page
|
| rmdata,phylo4d_ext,numeric,missing-method |
Man page
|
| rmdata,phylo4d_ext,numeric,numeric-method |
Man page
|
| rmdata-methods |
Man page
|
| show,phylo4d_ext-method |
Man page
|
| showSubNodes |
Man page
|
| snbranch |
Man page
|
| snbranch,list-method |
Man page
|
| snbranch,phylo4d_ext-method |
Man page
|
| sndata |
Man page
|
| sndata,list-method |
Man page
|
| sndata,phylo4d_ext-method |
Man page
|
| sndata<- |
Man page
|
| sndata<-,list-method |
Man page
|
| sndata<-,phylo4d_ext-method |
Man page
|
| snid |
Man page
|
| snid,list-method |
Man page
|
| snid,phylo4d_ext-method |
Man page
|
| snposition |
Man page
|
| snposition,list-method |
Man page
|
| snposition,phylo4d_ext-method |
Man page
|
| strip |
Man page
|
| tipdate.ci |
Man page
|
| treeHeight |
Man page
|
| treeHeight,phylo4-method |
Man page
|
| treeHeight,phylo4d-method |
Man page
|
| treeHeight,phylo4d_ext-method |
Man page
|
| treeHeight-methods |
Man page
|
| validPhylo4d_ext |
Man page
|
| weight |
Man page
|
| weight,list-method |
Man page
|
| weight,phylo4d_ext-method |
Man page
|
| weight<- |
Man page
|
| weight<-,list-method |
Man page
|
| weight<-,phylo4d_ext-method |
Man page
|
| write.nexus.simmap |
Man page
|
| write.simmap |
Man page
|
| write.simmap.new |
Man page
|
| write.simmap.old |
Man page
|
