is.simmap: Check SIMMAP v1.0
In phyext: An extension of some of the classes in phylobase. Tree objects now support subnodes on branches
Description
Usage
Arguments
Details
Value
Author(s)
Description
Check if text of file contains a SIMMAP-formatted (v1.0) newick file
Usage
1
Arguments
finput
A newick file
text
Newick file text
vers
Which simmap version to use
quick
If TRUE, then this function actually tries to explicitly convert the input to the specified simmap vers and catch any errors
Details
This function looks for '' and '' (or '[' and ']' depending on vers) characters in the text which would indicate that it is a SIMMAP-formatted file. Currently, versions 1.0 and 1.1 are supported.
Value
Logical
Author(s)
J. Conrad Stack
phyext documentation built on May 2, 2019, 5:19 p.m.
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Description Usage Arguments Details Value Author(s)
Description
Check if text of file contains a SIMMAP-formatted (v1.0) newick file
Usage
1 |
Arguments
finput |
A newick file |
text |
Newick file text |
vers |
Which simmap version to use |
quick |
If TRUE, then this function actually tries to explicitly convert the input to the specified simmap vers and catch any errors |
Details
This function looks for '' and '' (or '[' and ']' depending on vers) characters in the text which would indicate that it is a SIMMAP-formatted file. Currently, versions 1.0 and 1.1 are supported.
Value
Logical
Author(s)
J. Conrad Stack
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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