lhs.ellipses.add: Compute hull bounding ellipses

Description Usage Arguments Value Note

Description

Creates bounding ellipses around each hull and computes the eccentricity as a metric of ellongation

Usage

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lhs.ellipses.add(lhs, id = NULL, k = NULL, r = NULL, a = NULL,
  s = NULL, hs.names = NULL, status = TRUE, beep = FALSE,
  save.ellipses = TRUE, existing.ellipses = c("overwrite", "abort")[1])

Arguments

lhs

A LoCoH-hullset object

id

The name(s) of individuals to analyze

k

The k value of hullsets to analyze

r

The r value of hullsets to analyze

a

The a value of hullsets to analyze

s

The s value of hullsets to analyze

hs.names

The name(s) of saved hullsets to analyze

status

Show status messages (T/F)

beep

Beep when done (T/F)

save.ellipses

Save ellipses in the lhs object? (T/F). If False, only the eccentricity values of the ellipses are saved as a hull metric.

existing.ellipses

Whether to overwrite or abort if existing ellipses are saved

Value

A LoCoH-hullset object

Note

Saving the ellipses is optional. If ellipses are not saved, the eccentricity values will still be computed and saved as a hull metric. The only real reason to save ellipses is if you wish to plot them.

Note creating ellipses is computationally intensive and can take a long time.


tlocoh documentation built on May 2, 2019, 5:27 p.m.