API for ABSSeq
ABSSeq: a new RNA-Seq analysis method based on modelling absolute expression differences

Global functions
ABSDataSet Man page Source code
ABSDataSet-class Man page
ABSSeq Man page Source code
ABSSeqlm Man page Source code
LevelstoNormFC Man page
LevelstoNormFC,ABSDataSet-method Man page
LevelstoNormFC.ABSDataSet Source code
LevelstoNormFC<- Man page
LevelstoNormFC<-,ABSDataSet,numeric-method Man page
ReplaceOutliersByMAD Man page Source code
SumInfo-class Man page
[[<-,SumInfo,character,missing-method Man page
aFoldcomplexDesign Man page Source code
callDEs Man page Source code
callParameter Man page Source code
callParameterwithoutReplicates Man page Source code
callPergroup Source code
counts Man page
counts,ABSDataSet-method Man page
counts.ABSDataSet Source code
counts<- Man page
counts<-,ABSDataSet,matrix-method Man page
estimateSizeFactorsForMatrix Man page Source code
excounts Man page
excounts,ABSDataSet-method Man page
excounts.ABSDataSet Source code
excounts<- Man page
excounts<-,ABSDataSet,matrix-method Man page
genAFold Man page Source code
groups Man page
groups,ABSDataSet-method Man page
groups.ABSDataSet Source code
groups<- Man page
groups<-,ABSDataSet,factor-method Man page
maxRates Man page
maxRates,ABSDataSet-method Man page
maxRates.ABSDataSet Source code
maxRates<- Man page
maxRates<-,ABSDataSet,numeric-method Man page
minRates Man page
minRates,ABSDataSet-method Man page
minRates.ABSDataSet Source code
minRates<- Man page
minRates<-,ABSDataSet,numeric-method Man page
minimalDispersion Man page
minimalDispersion,ABSDataSet-method Man page
minimalDispersion.ABSDataSet Source code
minimalDispersion<- Man page
minimalDispersion<-,ABSDataSet,numeric-method Man page
normMethod Man page
normMethod,ABSDataSet-method Man page
normMethod.ABSDataSet Source code
normMethod<- Man page
normMethod<-,ABSDataSet,character-method Man page
normalFactors Man page Source code
paired Man page
paired,ABSDataSet-method Man page
paired.ABSDataSet Source code
paired<- Man page
paired<-,ABSDataSet,logical-method Man page
plotDifftoBase Man page Source code
preAFold Source code
preAFoldComplex Source code
qtotalNormalized Man page Source code
replaceByrow Source code
results Man page
results,ABSDataSet-method Man page
results.ABSDataSet Source code
sFactors Man page
sFactors,ABSDataSet-method Man page
sFactors<- Man page
sFactors<-,ABSDataSet,numeric-method Man page
simuN5 Man page
sizeFactors.ABSDataSet Source code
ABSSeq documentation built on May 2, 2018, 2:57 a.m.