counts: Accessors for the 'counts' slot of a ABSDataSet object.

Description

Accessors for the 'counts' slot of a ABSDataSet object, return a matrix

Usage

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## S4 method for signature 'ABSDataSet'
counts(object,norm=FALSE)

## S4 replacement method for signature 'ABSDataSet,matrix'
counts(object)<-value

Arguments

object

a ABSDataSet object.

norm

logical indicating whether or not to normalize the counts before returning

value

an numeric matrix

Details

The counts slot holds the count data as a matrix of non-negative integer count values, rows and columns for genes and samples, respectively.

See Also

sFactors, normalFactors

Examples

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Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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