minRates: Accessors for the 'minRates' slot of a ABSDataSet object.

In ABSSeq: ABSSeq: a new RNA-Seq analysis method based on modelling absolute expression differences

Description

Accessor functions for the 'minRates' slot of a ABSDataSet object.

Usage

## S4 method for signature 'ABSDataSet'
minRates(object)

## S4 replacement method for signature 'ABSDataSet,numeric'
minRates(object)<-value

Arguments

object	an ABSDataSet object.
value	a positive numeric object

Details

The 'minRates' is the lower bound of rate for baseline of counts difference esitimation.

See Also

callParameter,ABSDataSet

Examples

data(simuN5)
obj <- ABSDataSet(counts=simuN5$counts, groups=factor(simuN5$groups))
minRates(obj)
minRates(obj) <- 0.3
minRates(obj)

ABSSeq documentation built on Nov. 8, 2020, 5:07 p.m.