Files in CATALYST
Cytometry dATa anALYSis Tools

NEWS
DESCRIPTION
README.md
NAMESPACE
.travis.yml
inst/doc/differential_analysis.Rmd inst/doc/preprocessing.R inst/doc/differential_analysis.R
inst/doc/differential_analysis.html
inst/doc/preprocessing.html
inst/doc/preprocessing.Rmd inst/shinyGUI/ui-compensation.R inst/shinyGUI/ui-debarcoding.R inst/shinyGUI/ui-FCSchecking.R inst/shinyGUI/global.R inst/shinyGUI/server-debarcoding.R inst/shinyGUI/ui-concatenation.R inst/shinyGUI/server.R inst/shinyGUI/server-concatenation.R inst/shinyGUI/ui-guides.R inst/shinyGUI/module-debaPars.R inst/shinyGUI/server-FCSchecking.R inst/shinyGUI/ui.R inst/shinyGUI/ui-normalization.R inst/shinyGUI/server-normalization.R inst/shinyGUI/helpers.R inst/shinyGUI/module-yieldPlot.R inst/shinyGUI/server-compensation.R
inst/shinyGUI/data/Fluidigm_default_metals.rds
vignettes/science.csl
vignettes/refs.bib
vignettes/estCutoffs.png
vignettes/differential_analysis.Rmd
vignettes/methods.png
vignettes/interactions.png
vignettes/preprocessing.Rmd R/outFCS.R R/estCutoffs.R R/dbFrame-methods.R R/plotClusterHeatmap.R R/daFrame-methods.R R/data.R R/plotSpillmat.R R/applyCutoffs.R R/plotDiffHeatmap.R R/adaptSpillmat.R R/helpers-concatenation.R R/compCytof.R R/plotAbundances.R R/guessPanel.R R/validityChecks.R R/plotCounts.R R/tSNE.R R/helpers-compensation.R R/helpers-differential.R R/plotExprs.R R/helpers-debarcoding.R R/helpers-normalization.R R/plotMahal.R R/AllClasses.R R/plotYields.R R/plotMDS.R R/outFrames.R R/mergeClusters.R R/plotSNE.R R/assignPrelim.R R/plotMedExprs.R R/AllGenerics.R R/extractClusters.R R/plotEvents.R R/plotExprHeatmap.R R/show-methods.R R/plotCodes.R R/cluster.R R/plotNRS.R R/computeSpillmat.R R/launchGUI.R R/concatFCS.R R/normCytof.R man/dbFrame-methods.Rd man/plotMahal.Rd man/compCytof.Rd man/launchGUI.Rd man/plotExprHeatmap.Rd man/daFrame-class.Rd man/assignPrelim.Rd man/plotSNE.Rd man/plotClusterHeatmap.Rd man/plotMDS.Rd man/mergeClusters.Rd man/plotYields.Rd man/daFrame-methods.Rd man/plotMedExprs.Rd man/normCytof.Rd man/plotCodes.Rd man/plotNRS.Rd man/extractClusters.Rd man/cluster.Rd man/adaptSpillmat.Rd man/outFrames.Rd man/tSNE.Rd man/concatFCS.Rd man/guessPanel.Rd man/plotEvents.Rd man/applyCutoffs.Rd man/dbFrame-class.Rd man/plotAbundances.Rd man/plotExprs.Rd man/plotCounts.Rd man/data.Rd man/outFCS.Rd man/computeSpillmat.Rd man/estCutoffs.Rd man/plotDiffHeatmap.Rd man/plotSpillmat.Rd
build/vignette.rds
tests/testthat.R tests/testthat/test_assignPrelim.R tests/testthat/test_computeSpillmat.R tests/testthat/test_helpers-compensation.R tests/testthat/test_compCytof.R
docs/logo.png
data/isotope_list.rda
data/PBMC_fs.rda
data/merging_table.rda
data/ss_exp.rda
data/sample_key.rda
data/raw_data.rda
data/PBMC_md.rda
data/datalist
data/sample_ff.rda
data/mp_cells.rda
data/PBMC_panel.rda
CATALYST documentation built on May 19, 2018, 6:01 p.m.