downloadKEGGPathwayList: Retrieve all availiable pathways for an organism.
In CHRONOS: CHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis
Description
Usage
Arguments
Details
Value
References
Examples
View source: R/pathwayDownload.R
Description
Retrieve all availiable pathways for an organism.
Usage
1
Arguments
org
KEGG organism identifier.
Details
.
Value
Data frame of pathway ids and names.
References
Examples
1
2
3
4
5
# Load extracted linear subpathways from toy data
load(system.file('extdata', 'Examples//data.RData', package='CHRONOS'))
# Retrieve all availiable hsa pathways
## Not run: pathways <- downloadKEGGPathwayList(org='hsa')
CHRONOS documentation built on Nov. 8, 2020, 8:30 p.m.
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Description Usage Arguments Details Value References Examples
View source: R/pathwayDownload.R
Description
Retrieve all availiable pathways for an organism.
Usage
1 |
Arguments
org |
KEGG organism identifier. |
Details
.
Value
Data frame of pathway ids and names.
References
Examples
1 2 3 4 5 | # Load extracted linear subpathways from toy data
load(system.file('extdata', 'Examples//data.RData', package='CHRONOS'))
# Retrieve all availiable hsa pathways
## Not run: pathways <- downloadKEGGPathwayList(org='hsa')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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