joinAreas: joinAreas
In CONFESS: Cell OrderiNg by FluorEScence Signal
Description
Usage
Arguments
Value
View source: R/internal_fluo_est.R
Description
It estimates the spot area by joining the red and green bright spot location estimates.
Usage
1
Arguments
areaR
Data matrix. The bright (spot) coordinates in one channel.
areaG
Data matrix. The bright (spot) coordinates in the other channel.
center
Data matrix. The 2-dimensional location of the spot's center.
areaBased
Integer. Defines a rectangular pseudo-spot size whose fluorescence will be estimated.
warning
Character string. An indicator of the estimation type that has been internally performed, i.e.
fluorescence-based or BF image modelling.
chaImgs
Data matrix. The channel binary segmented image data that are used for reference to obtain the
area of interest.
Value
The coordinates of the spot area and its length in pixels.
CONFESS documentation built on Nov. 8, 2020, 6:05 p.m.
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Description Usage Arguments Value
View source: R/internal_fluo_est.R
Description
It estimates the spot area by joining the red and green bright spot location estimates.
Usage
1 |
Arguments
areaR |
Data matrix. The bright (spot) coordinates in one channel. |
areaG |
Data matrix. The bright (spot) coordinates in the other channel. |
center |
Data matrix. The 2-dimensional location of the spot's center. |
areaBased |
Integer. Defines a rectangular pseudo-spot size whose fluorescence will be estimated. |
warning |
Character string. An indicator of the estimation type that has been internally performed, i.e. fluorescence-based or BF image modelling. |
chaImgs |
Data matrix. The channel binary segmented image data that are used for reference to obtain the area of interest. |
Value
The coordinates of the spot area and its length in pixels.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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