step1: step1

In CONFESS: Cell OrderiNg by FluorEScence Signal

Description

Example output of the createFluo function

Usage

data("step1")

Format

The format is: List of 7 $ index : int [1:246] 1 2 3 4 5 6 7 8 9 10 ... $ RGexprs :'data.frame': 246 obs. of 4 variables: ..$ fore_Green: num [1:246] 48.4 26.2 45.7 34 24 ... ..$ back_Green: num [1:246] 17.2 17 16.8 17.1 16.8 ... ..$ fore_Red : num [1:246] 219.1 86.5 18.4 84.4 104.3 ... ..$ back_Red : num [1:246] 17.3 17 18 17.7 17.5 ... $ samples : chr [1:246] "1772-062-248_A01" "1772-062-248_A03" "1772-062-248_A04" "1772-062-248_A06" ... $ batch : chr [1:246, 1:2] "1772-062-248" "1772-062-248" "1772-062-248" "1772-062-248" ... $ Size : num [1:246] 31 19 152 43 59 21 72 81 31 56 ... $ image.type: chr [1:3] "BF" "Green" "Red" $ dateIndex : chr "WedMar2313:29:522016"

Value

example intermediates

CONFESS documentation built on Nov. 8, 2020, 6:05 p.m.