straightRowLines: straightRowLines
In CONFESS: Cell OrderiNg by FluorEScence Signal
Description
Usage
Arguments
Value
View source: R/internal_fluo_est.R
Description
It identifies the horizontal BF image characteristic lines.
Usage
1
straightRowLines(colData, pattern.search, ImgLimits)
Arguments
colData
List. The data to be analyzed.
pattern.search
Integer. A cutoff to find horizontal and vertical lines on the chip
ImgLimits
Integer. It instructs the algorithm to find spots in a certain central image area.
For example, for a 512 x 512 image with cutSides = 50, it will search for spots in the central
area [ImgLimits:(512-ImgLimits),ImgLimits:(512-ImgLimits)] of the image matrix.
Value
The estimated horizontal BF characteristic lines
CONFESS documentation built on Nov. 8, 2020, 6:05 p.m.
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Description Usage Arguments Value
View source: R/internal_fluo_est.R
Description
It identifies the horizontal BF image characteristic lines.
Usage
1 | straightRowLines(colData, pattern.search, ImgLimits)
|
Arguments
colData |
List. The data to be analyzed. |
pattern.search |
Integer. A cutoff to find horizontal and vertical lines on the chip |
ImgLimits |
Integer. It instructs the algorithm to find spots in a certain central image area. For example, for a 512 x 512 image with cutSides = 50, it will search for spots in the central area [ImgLimits:(512-ImgLimits),ImgLimits:(512-ImgLimits)] of the image matrix. |
Value
The estimated horizontal BF characteristic lines
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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