straightRowLines: straightRowLines

Description Usage Arguments Value

View source: R/internal_fluo_est.R

Description

It identifies the horizontal BF image characteristic lines.

Usage

1
straightRowLines(colData, pattern.search, ImgLimits)

Arguments

colData

List. The data to be analyzed.

pattern.search

Integer. A cutoff to find horizontal and vertical lines on the chip

ImgLimits

Integer. It instructs the algorithm to find spots in a certain central image area. For example, for a 512 x 512 image with cutSides = 50, it will search for spots in the central area [ImgLimits:(512-ImgLimits),ImgLimits:(512-ImgLimits)] of the image matrix.

Value

The estimated horizontal BF characteristic lines


CONFESS documentation built on Nov. 8, 2020, 6:05 p.m.