QCdba-methods: Retrieve the 'DBA' object associated with an experiment
In ChIPQC: Quality metrics for ChIPseq data
Description
Methods
Author(s)
See Also
Examples
Description
Retrieve the DBA object associated with a ChIPQCexperiment object.
Methods
signature(object = "ChIPQCexperiment")-
Retrieves the DBA object associated with a ChIPQCexperiment. This object can be used with DiffBind functions to further analyse a ChIP-seq experiment, including performing a differential binding analysis.
Author(s)
Rory Stark and Thomas Carroll
See Also
ChIPQC-package, ChIPQCexperiment, DiffBind, dba
Examples
1
2
3
4
data(tamoxifen_QC)
tamoxifenDBA = QCdba(tamoxifen)
## library(DiffBind)
## tamoxifenDBA
ChIPQC documentation built on Nov. 8, 2020, 8:06 p.m.
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Description Methods Author(s) See Also Examples
Description
Retrieve the DBA object associated with a ChIPQCexperiment object.
Methods
signature(object = "ChIPQCexperiment")-
Retrieves the
DBAobject associated with aChIPQCexperiment. This object can be used withDiffBindfunctions to further analyse a ChIP-seq experiment, including performing a differential binding analysis.
Author(s)
Rory Stark and Thomas Carroll
See Also
ChIPQC-package, ChIPQCexperiment, DiffBind, dba
Examples
1 2 3 4 | data(tamoxifen_QC)
tamoxifenDBA = QCdba(tamoxifen)
## library(DiffBind)
## tamoxifenDBA
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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