geneBiomart: AnnotationTrack objects from biomaRt
In GenomeGraphs: Plotting genomic information from Ensembl
Description
Usage
Arguments
Value
Author(s)
View source: R/GenomeGraphs-classes.R
Description
Convenience function to construct an AnnotationTrack object from biomaRt.
Usage
1
geneBiomart(id, biomart, type = "ensembl_gene_id", dp = NULL)
Arguments
id
Gene identifier
biomart
Mart object connected to BioMart database, use useMart function to generate
type
Type of identifier used, this should be a filter of the BioMart database e.g. ensembl_gene_id, hgnc_symbol
dp
Display parameters
Value
An AnnotationTrack object
Author(s)
James Bullard
GenomeGraphs documentation built on Oct. 31, 2019, 4:34 a.m.
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Description Usage Arguments Value Author(s)
View source: R/GenomeGraphs-classes.R
Description
Convenience function to construct an AnnotationTrack object from biomaRt.
Usage
1 | geneBiomart(id, biomart, type = "ensembl_gene_id", dp = NULL)
|
Arguments
id |
Gene identifier |
biomart |
Mart object connected to BioMart database, use useMart function to generate |
type |
Type of identifier used, this should be a filter of the BioMart database e.g. ensembl_gene_id, hgnc_symbol |
dp |
Display parameters |
Value
An AnnotationTrack object
Author(s)
James Bullard
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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