getMatchInfo.JointIdMap: Get match table(s) for a given set of primary IDs

Description Usage Arguments Value Author(s) See Also Examples

Description

Get match table(s) for a given set of primary IDs.

Usage

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## S3 method for class 'JointIdMap'
getMatchInfo(this, IDs, idMapNames=NULL, ...)

Arguments

IDs

A character vector of primary IDs

idMapNames

A character vector of Id Map names encapsulated within the jointIdMap object or NULL, in which case all Id Maps are used. Default is NULL.

...

Not used

Value

A list of match table(s) for a given set of primary IDs. The match table is a data frame where the column set is a union of secondary IDs over all idMapNames for a given primary ID while each row containes the matches between the primary ID and a particular secondary ID for a given IdMap.

Author(s)

Alex Lisovich, Roger Day

See Also

For more information see JointIdMap.

Examples

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 jointIdMap<-JointIdMap(examples$identDfList);
 #get match info for Uniprot accessions P48539 and Q5T089
 matches<-jointIdMap$getMatchInfo(c("P48539","Q5T089"));
 print(matches);
 

IdMappingAnalysis documentation built on Oct. 31, 2019, 3:30 a.m.