mixture.boxplot.JointUniquePairs: Boxplot of a mixture model component by match group
In IdMappingAnalysis: ID Mapping Analysis

Description Usage Arguments Value Author(s) See Also Examples

Creates a boxplot of mixture component data from the Mixture object by a set of match groups from the JointUniquePairs object, utilizing the JointUniquePairs$boxplot function

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## S3 method for class 'JointUniquePairs'
mixture.boxplot(this, corr, idMapNames=NULL, show.None=FALSE, subsetting=FALSE, group.gap=0.2, G=c(1:5), plot.G=NULL, cex.main=1.2, cex.lab=1, srt=0, adj=0, par.zoom=1, main="Component posterior probability by match group", plot=TRUE, verbose=FALSE, ...)

`corr`	Corr object from which the Mixture object is constructed on the fly to use one of it'c components for the boxplot corresponding to the best fit is plotted.
`idMapNames`	Defines a subset of match group names to be plotted. If `NULL` (default), all group names within the pairsMatch are used.
`subsetting`	If `TRUE`, interprets Corr subset as a full group or uses the original Corr as a full group otherwise. Default is `FALSE`.
`show.None`	If not `NA`, includes a plot of subset of values not included into any other match group with 'None' label. Default is `NA`.
`group.gap`	The gap between match groups. Default is 0.2.
`cex.main`	Font size for plot main title. Default is 1.2.
`cex.lab`	Font size for X and Y axis titles. Default is 1.
`srt`	Match group label orientation (see par('srt')). The default is 0.
`adj`	`numeric` in a range (0..1) determening how close to the x-axis the group labels are, 1 being the closest and 0 is farthest. The default is 0.
`G`	Number of components in mixture model. If G is a `vector`, the optimal number of component is determined. G is a vector (1:5) by default.
`plot.G`	The mixture component to be used for plotting. If `NULL` (default), the highest-order component of the mixture model is used.
`par.zoom`	Graphics parameters zoom factor. Scales the graphical parameters like cex, lwd, mai etc. Default is 1.
`main`	The main title. Default is 'Component posterior probability by match group'
`plot`	if `TRUE` (default) then a boxplot is produced. If not, the summaries which the boxplots are based on are returned.
`verbose`	If `TRUE` enables diagnostic messages. Default is `FALSE`.
`...`	Additional graphical parameters

Same as for boxplot in graphics package

Alex Lisovich, Roger Day

For more information see JointUniquePairs.

 #plot posterior second component probability distributions by match group
 mapNames=list(NetAffx_Q="Affy_Q",DAVID_F="D_F",EnVision_Q="EnQ");
 examples$jointUniquePairs$mixture.boxplot(examples$corr,
	idMapNames=mapNames,
	multiline=TRUE,subsetting=TRUE, plot.G=2,
	srt=35, col.points="red",verbose=TRUE);