Description Objects from the Class Slots Methods Author(s)
An object of class UTR3eSet
represents the results of 3UTR usage
Objects can be created by calls of the form
new("UTR3eSet", usage, PDUI, PDUI.log2, short, long, signals, testRes)
usage
an GRanges object with CP sites info.
PDUI
a matrix of PDUI
PDUI.log2
log2 transformed PDUI matrix
short
a matrix of usage of short form
long
a matrix of usage of long form
signals
signals used for single sample
testRes
a matrix of test results of testUsage
Get or set the slot of UTR3eSet
Convert a UTR3eSet to an ExpressionSet.
Convert a UTR3eSet to an GRanges.
Jianhong Ou
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