Alternative polyadenylation (APA) is one of the important post-transcriptional regulation mechanisms which occurs in most human genes. InPAS facilitates the discovery of novel APA sites and the differential usage of APA sites from RNA-Seq data. It leverages cleanUpdTSeq to fine tune identified APA sites by removing false sites due to internal-priming.
|Author||Jianhong Ou, Sungmi M. Park, Michael R. Green and Lihua Julie Zhu|
|Bioconductor views||AlternativeSplicing Coverage DifferentialSplicing GeneRegulation ImmunoOncology RNASeq Sequencing Transcription|
|Maintainer||Jianhong Ou <email@example.com>, Lihua Julie Zhu <Julie.Zhu@umassmed.edu>|
|License||GPL (>= 2)|
|Package repository||View on Bioconductor|
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