InPAS: Identification of Novel alternative PolyAdenylation Sites (PAS)

Alternative polyadenylation (APA) is one of the important post-transcriptional regulation mechanisms which occurs in most human genes. InPAS facilitates the discovery of novel APA sites from RNAseq data. It leverages cleanUpdTSeq to fine tune identified APA sites.

Package details

AuthorJianhong Ou, Sung Mi Park, Michael R. Green and Lihua Julie Zhu
Bioconductor views AlternativeSplicing Coverage DifferentialSplicing GeneRegulation ImmunoOncology RNASeq Sequencing Transcription
MaintainerJianhong Ou <[email protected]>, Lihua Julie Zhu <[email protected]>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
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InPAS documentation built on Dec. 2, 2018, 6:01 p.m.