get.regions.coverage: claculate coverage for giving region

Description Usage Arguments Value Author(s)

View source: R/get.regions.coverage.R

Description

claculate coverage for giving region

Usage

1
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get.regions.coverage(chr, utr3.regions.chr, 
                                 hugeData, coverage, phmm=FALSE)

Arguments

chr

chromosome

utr3.regions.chr

the GRanges of region to be extracted

hugeData

is it a huge dataset?

coverage

output of coverageFromBedGraph

phmm

prepare data for singleSample analysis?

Value

GRanges with coverage data

Author(s)

Jianhong Ou


InPAS documentation built on April 29, 2020, 5:19 a.m.