extract_features: Extract all spatial features

Description Usage Arguments Value Examples

Description

Extract all spatial features

Usage

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extract_features(x, ...)

## S4 method for signature 'ImageSet'
extract_features(x, name = "", rm.na = FALSE)

Arguments

x

IrisSpatialFeatures ImageSet object

...

Additional arguments

name

Prefix for all features, e.g. 'invasive_margin' (Default: ”)

rm.na

Should features with NA values be removed (Default: FALSE)

Value

dataframe of features

Examples

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#' #loading pre-read dataset
dataset <- IrisSpatialFeatures_data
dataset <- extract_nearest_neighbor(dataset,min_num_cells=2)
dataset <- extract_proximity(dataset,only_closest=TRUE,radii=25)
dataset <- extract_interactions(dataset)
extract_features(dataset)

IrisSpatialFeatures documentation built on May 2, 2018, 2:49 a.m.