extract_nearest_neighbor: Extract the distance to each nearest neighbor for each...

In IrisSpatialFeatures: A package to extract spatial features based on multiplex IF images

Description

Extract the distance to each nearest neighbor for each cell-type

Usage

extract_nearest_neighbor(x, ...)

## S4 method for signature 'ImageSet'
extract_nearest_neighbor(x, min_num_cells = 10)

Arguments

x	IrisSpatialFeatures ImageSet object
...	Additional arguments
min_num_cells	Minimum number of cell that a coordinate needs to have in order to calculate the statistics (Default: 10)

Value

distance to nearest neighbor for each

Examples

#loading pre-read dataset
dataset <- IrisSpatialFeatures_data
extract_nearest_neighbor(dataset)

IrisSpatialFeatures documentation built on May 2, 2018, 2:49 a.m.