raw_data-class: Class to represent the raw data that is output by inForm
In IrisSpatialFeatures: A package to extract spatial features based on multiplex IF images

Description Slots

Class to represent the raw data that is output by inForm

data: Raw coordinate data sheet
summary: Inform summary (optional)
score: Score table that indicates intensity cutoff for certain markers
mem_seg_map: Membrane map as output by inForm
nuc_seg_map: Nuclear map as output by inForm (optional)
component_tiff: component tiff as output by inForm (optional)

IrisSpatialFeatures documentation built on May 2, 2018, 2:49 a.m.

IrisSpatialFeatures index

Package overview README.md Vignette Title IrisSpatialFeatures - An R package to quantify the tumor microenvironment based

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