get_proximities: Get proximity data for a given cell-type
In IrisSpatialFeatures: A package to extract spatial features based on multiplex IF images
Description
Usage
Arguments
Value
Description
Get proximity data for a given cell-type
Usage
1
2
3
4
get_proximities(x, ...)
## S4 method for signature 'ImageSet'
get_proximities(x, marker, normalize = TRUE)
Arguments
x
An IrisSpatialFeatures ImageSet object.
...
Additional arguments.
marker
Cell type for which the proximity data should be extracted.
normalize
Flag indicating whether the populations should be normalized so that the sum of all is 1 (default: TRUE).
Value
proximities for a specific cell-type
IrisSpatialFeatures documentation built on May 2, 2018, 2:49 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Get proximity data for a given cell-type
Usage
1 2 3 4 | get_proximities(x, ...)
## S4 method for signature 'ImageSet'
get_proximities(x, marker, normalize = TRUE)
|
Arguments
x |
An IrisSpatialFeatures ImageSet object. |
... |
Additional arguments. |
marker |
Cell type for which the proximity data should be extracted. |
normalize |
Flag indicating whether the populations should be normalized so that the sum of all is 1 (default: TRUE). |
Value
proximities for a specific cell-type
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.