MethTargetedNGS: Perform Methylation Analysis on Next Generation Sequencing Data

Perform step by step methylation analysis of Next Generation Sequencing data.

AuthorMuhammad Ahmer Jamil with Contribution of Prof. Holger Frohlich and Priv.-Doz. Dr. Osman El-Maarri
Date of publicationNone
MaintainerMuhammad Ahmer Jamil <engr.ahmerjamil@gmail.com>
LicenseArtistic-2.0
Version1.6.0

View on Bioconductor

Files in this package

MethTargetedNGS/DESCRIPTION
MethTargetedNGS/NAMESPACE
MethTargetedNGS/R
MethTargetedNGS/R/bisulfiteConversion.R MethTargetedNGS/R/hmmer.R MethTargetedNGS/R/sequenceAlignment.R
MethTargetedNGS/build
MethTargetedNGS/build/vignette.rds
MethTargetedNGS/inst
MethTargetedNGS/inst/doc
MethTargetedNGS/inst/doc/MethTargetedNGS.R
MethTargetedNGS/inst/doc/MethTargetedNGS.Rnw
MethTargetedNGS/inst/doc/MethTargetedNGS.pdf
MethTargetedNGS/inst/extdata
MethTargetedNGS/inst/extdata/Healthy.fasta
MethTargetedNGS/inst/extdata/Reference.fasta
MethTargetedNGS/inst/extdata/Tumor.fasta
MethTargetedNGS/inst/extdata/bisulfite.fasta
MethTargetedNGS/inst/extdata/msa.fasta
MethTargetedNGS/man
MethTargetedNGS/man/MethTargetedNGS-package.Rd MethTargetedNGS/man/bconv.Rd MethTargetedNGS/man/compare_samples.Rd MethTargetedNGS/man/fishertest_cpg.Rd MethTargetedNGS/man/hmmbuild.Rd MethTargetedNGS/man/methAlign.Rd MethTargetedNGS/man/methAvg.Rd MethTargetedNGS/man/methEntropy.Rd MethTargetedNGS/man/methHeatmap.Rd MethTargetedNGS/man/nhmmer.Rd MethTargetedNGS/man/odd_ratio.Rd
MethTargetedNGS/vignettes
MethTargetedNGS/vignettes/MethTargetedNGS.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.