API for NanoStringQCPro
Quality metrics and data processing methods for NanoString mRNA gene expression data

Global functions
.RccSet Man page
NAifNULL Source code
NanoStringQCPro Man page
NanoStringQCPro-package Man page
RccSet Man page
RccSet,ExpressionSet-method Man page
RccSet,environment-method Man page
RccSet,matrix-method Man page
RccSet,missing-method Man page
RccSet-class Man page
addCodesetAnnotation Man page
addCodesetAnnotation,RccSet-method Man page
addQCFlags Man page
addQCFlags,RccSet-method Man page
allSumPlot Man page
allSumPlot,RccSet-method Man page
assessHousekeeping Man page
assessHousekeeping,RccSet-method Man page
bdPlot Man page
bdPlot,RccSet-method Man page
buildCodesetAnnotation Man page Source code
centeredSampleClustering Source code
checkRccSet Man page
checkRccSet,RccSet-method Man page
check_cols Source code
colByCovar Man page Source code
colByFun Man page Source code
contentNorm Man page
contentNorm,RccSet-method Man page
copyRccSet Man page
copyRccSet,RccSet-method Man page
countsInBlankSamples_verticalPlot Man page Source code
ctrlsOverviewPlot Man page
ctrlsOverviewPlot,RccSet-method Man page
ctrlsZprimePlot Man page
ctrlsZprimePlot,RccSet-method Man page
cutoffByMMAD Man page Source code
cutoffByVar Man page Source code
dCoVar Man page Source code
densityPlot Man page Source code
example_rccSet Man page
flagSamplesCount Man page
flagSamplesCount,RccSet-method Man page
flagSamplesCtrl Man page
flagSamplesCtrl,RccSet-method Man page
flagSamplesTech Man page
flagSamplesTech,RccSet-method Man page
fovPlot Man page
fovPlot,RccSet-method Man page
geneClustering Man page Source code
getBackground Man page
getBackground,RccSet-method Man page
getBlankLabel Man page
getBlankLabel,RccSet-method Man page
getSpikeInInput Man page Source code
iqrPlot Man page
iqrPlot,RccSet-method Man page
lodAssess Man page
lodAssess,RccSet-method Man page
lodPlot Man page
lodPlot,RccSet-method Man page
makeQCReport Man page
makeQCReport,RccSet-method Man page
myCols Man page Source code
nSolverBackground Man page
nSolverBackground,RccSet-method Man page
nSolverCsv.to.pdata_fdata_adata Man page Source code
negCtrlsByLane Man page
negCtrlsByLane,RccSet-method Man page
negCtrlsByLane_verticalPlot Man page Source code
negCtrlsPairs Man page
negCtrlsPairs,RccSet-method Man page
negCtrlsPlot Man page
negCtrlsPlot,RccSet-method Man page
newRccSet Man page Source code
panelCor Man page Source code
pcaPlot Man page Source code
pdata_fdata_adata.to.rccSet Man page Source code
posCtrlNorm Man page
posCtrlNorm,RccSet-method Man page
posNormFactPlot Man page
posNormFactPlot,RccSet-method Man page
posR2Plot Man page
posR2Plot,RccSet-method Man page
posRatioPlot Man page
posRatioPlot,RccSet-method Man page
posSlopePlot Man page
posSlopePlot,RccSet-method Man page
posSumVsAllSumPlot Man page
posSumVsAllSumPlot,RccSet-method Man page
preprocRccSet Man page
preprocRccSet,RccSet-method Man page
presAbsCall Man page
presAbsCall,RccSet-method Man page
previewPNG Man page Source code
rccFiles.to.pdata_fdata_adata Man page Source code
readCdrDesignData Man page Source code
readRcc Man page Source code
readRccBatch Man page Source code
readRccCollectorToolExport Man page Source code
readRlf Man page Source code
sampleClustering Man page
sampleClustering,RccSet-method Man page
scatterPair Man page Source code
subtractBackground Man page
subtractBackground,RccSet-method Man page
zfacFun Man page Source code
NanoStringQCPro documentation built on Nov. 8, 2020, 8:11 p.m.