as.table.referenceComparison: Cross Tabulation and Table Creation

In cTRAP: Identification of candidate causal perturbations from differential gene expression data

Description

Cross Tabulation and Table Creation

Usage

## S3 method for class 'referenceComparison'
as.table(x, ..., clean = TRUE)

Arguments

x	referenceComparison object
...	Extra parameters not currently used
clean	Boolean: only show certain columns (to avoid redundancy)?

Value

Complete table with metadata based on a targetingDrugs object

See Also

Other functions related with the ranking of CMap perturbations: filterCMapMetadata(), getCMapConditions(), getCMapPerturbationTypes(), loadCMapData(), loadCMapZscores(), parseCMapID(), plot.perturbationChanges(), plot.referenceComparison(), plotTargetingDrugsVSsimilarPerturbations(), prepareCMapPerturbations(), print.similarPerturbations(), rankSimilarPerturbations()

Other functions related with the prediction of targeting drugs: listExpressionDrugSensitivityAssociation(), loadExpressionDrugSensitivityAssociation(), plot.referenceComparison(), plotTargetingDrugsVSsimilarPerturbations(), predictTargetingDrugs()

cTRAP documentation built on Nov. 8, 2020, 10:58 p.m.